Fetal Brain Multi-Omics Atlas

Integrated Spatial Transcriptomics and Single-Cell Multiomics Uncover Cell-Type-Specific Deficits in the Fetal Down Syndrome Brain

An integrated resource of Stereo-seq spatial transcriptomics, single-cell RNA-seq, scATAC-seq, and genetic risk mapping across the fetal brain.

4Datasets

10.6MCells

32KGenes

Exploration Modules

Navigate the multi-omics analysis pipeline

Interactive fetal brain anatomy with tissue and regional segmentations.

Spatial transcriptomics across 10.6M cells with gene expression overlay.

Single-cell RNA expression landscapes and cell type clustering.

Chromatin accessibility and regulatory element activity profiles.

Genetic risk enrichment mapped across spatial brain regions.